PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004512115.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family DBB
Protein Properties Length: 184aa    MW: 20276 Da    PI: 7.3755
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004512115.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.72e-07433534
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                     C+ +e+  ++ fC  ++  lC+ C ++ H
  XP_004512115.1  4 LCDACESAAAIVFCAADEAALCRACDEKVH 33
                    7**************************998 PP

2zf-B_box30.95.7e-105291237
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
                    + ++C+ +e+ ++ ++Ce++++ lC +C +  H g    H
  XP_004512115.1 52 DVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGgkrtH 91
                    6799**************************9995544455 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003364.4E-8147IPR000315B-box-type zinc finger
PROSITE profilePS5011910.239147IPR000315B-box-type zinc finger
CDDcd000211.27E-6345No hitNo description
PfamPF006437.3E-6342IPR000315B-box-type zinc finger
SuperFamilySSF578459.16E-64886No hitNo description
SMARTSM003362.1E-115196IPR000315B-box-type zinc finger
PROSITE profilePS501199.1585196IPR000315B-box-type zinc finger
PfamPF006439.1E-85290IPR000315B-box-type zinc finger
CDDcd000211.66E-75484No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010100Biological Processnegative regulation of photomorphogenesis
GO:0070370Biological Processcellular heat acclimation
GO:0071483Biological Processcellular response to blue light
GO:0005634Cellular Componentnucleus
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MRTLCDACES AAAIVFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLASP SDVPRCDICE  60
NAPAFFYCET DGSSLCLQCD MIVHVGGKRT HGRYLLFRQR VEFPGDKSSN ADNQGSQRMD  120
PGDSKKEQSP LPKLKMGEKQ QNHRMPPVPT SGADADGHAK TENKMIDLNM KPNRIHEQTS  180
NNQP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004512115.11e-137PREDICTED: B-box zinc finger protein 18-like
RefseqXP_012574433.11e-137PREDICTED: B-box zinc finger protein 18-like
SwissprotC0SVM51e-75BBX19_ARATH; B-box zinc finger protein 19
TrEMBLI1J8N51e-122I1J8N5_SOYBN; Uncharacterized protein
STRINGGLYMA01G37370.11e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27343370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.16e-77DBB family protein